GSTR-9 Annual Return Late Fee Calculator

Filed your GSTR-9 annual return late? The due date is December 31 after the financial year ends. Calculate your Section 47 late fee.

This calculation's inputs

Return type: GSTR-9
Filing status: Normal (tax payable)
Tax period: 2023-2024
Actual filing date: 2025-03-15
Total tax liability: ₹0

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Late fee and interest

Total payable

₹14,800

74 days late (due: 2024-12-31)

Late fee (CGST)

₹7,400

Late fee (SGST)

₹7,400

Total late fee

₹14,800

Interest (18% p.a.)

₹0

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About this scenario

GSTR-9 (annual return) is due by December 31 of the year following the financial year. For FY 2023-24, the due date is December 31, 2024. Late fee accrues from January 1, 2025 onward at ₹200/day (₹100 CGST + ₹100 SGST), subject to a cap based on turnover.

Frequently asked questions

Under Section 47 of the CGST Act, the late fee is ₹50 per day (₹25 CGST + ₹25 SGST) for a normal GSTR-3B return, subject to a cap based on annual turnover: ₹2,000 for turnover up to ₹1.5 crore, ₹5,000 for ₹1.5-5 crore, and ₹10,000 for above ₹5 crore. The fee is charged from the day after the due date until the actual filing date.

For NIL returns (no tax liability), the late fee is ₹20 per day (₹10 CGST + ₹10 SGST), subject to the same turnover-based caps. No interest under Section 50 applies to NIL returns since there is no outstanding tax liability.

No. GST late fees can only be paid in cash through the GST portal electronic cash ledger. You cannot offset late fees against your Input Tax Credit (ITC) balance. This is a common point of confusion: only the tax liability portion (CGST, SGST, IGST) can be paid using ITC; penalties and late fees must be paid in cash.

Section 50 of the CGST Act requires you to pay interest at 18% per annum on any net tax liability paid after the due date. It is calculated on the outstanding cash tax liability (after ITC adjustment) for the number of days delayed. Interest cannot be paid using ITC and must be deposited in cash. A higher rate of 24% applies only on excess ITC claims.

The GST portal does not allow filing of returns older than 3 years from the original due date. If you miss this window, you cannot file the return at all, which can create compliance issues, block your GST registration renewal, and lead to assessments by the GST department. The 3-year cut-off is absolute and has no provision for condonation.

Related calculators

Late fee under Section 47 of CGST Act 2017. Interest under Section 50 at 18% p.a. For guidance only. Consult a GST practitioner for official liability determination.

GSTR-9 Annual Return Late Fee Calculator

About this scenario

What is the due date for GSTR-9 annual return?

Frequently asked questions

How is the GSTR-3B late fee calculated?

What is the late fee for a NIL GSTR-3B return?

Can I pay the GSTR-3B late fee using ITC?

What is Section 50 interest and when does it apply?

What happens if I miss the 3-year GST filing deadline?